{
  "_id": "6a18103bacfb0bcc41dae646",
  "Package": "pandemics",
  "Type": "Package",
  "Title": "Monitoring a Developing Pandemic with Available Data",
  "Version": "0.1.0",
  "Authors@R": "c(\nperson(\"María Luz\",\"Gámiz\",\nemail=\"mgamiz@ugr.es\",\nrole = c(\"aut\",\"cph\")),\nperson(\"Enno\",\"Mammen\",\nemail=\"mammen@math.uni-heidelberg.de\",\nrole = c(\"aut\",\"cph\")),\nperson(\"María Dolores\",\"Martínez-Miranda\",\nemail=\"mmiranda@ugr.es\",\nrole = c(\"aut\", \"cre\",\"cph\")),\nperson(\"Jens Perch\",\"Nielsen\",\nemail=\"Jens.Nielsen.1@city.ac.uk\",\nrole = c(\"aut\",\"cph\"))\n)",
  "Author": "María Luz Gámiz [aut, cph], Enno Mammen [aut, cph], María\nDolores Martínez-Miranda [aut, cre, cph], Jens Perch Nielsen\n[aut, cph]",
  "Maintainer": "María Dolores Martínez-Miranda <mmiranda@ugr.es>",
  "Description": "Full dynamic system to describe and forecast the spread\nand the severity of a developing pandemic, based on available\ndata. These data are number of infections, hospitalizations,\ndeaths and recoveries notified each day. The system consists of\nthree transitions, infection-infection, infection-hospital and\nhospital-death/recovery. The intensities of these transitions\nare dynamic and estimated using non-parametric local linear\nestimators. The package can be used to provide forecasts and\nsurvival indicators such as the median time spent in hospital\nand the probability that a patient who has been in hospital for\na number of days can leave it alive. Methods are described in\nGámiz, Mammen, Martínez-Miranda, and Nielsen (2024)\n<doi:10.48550/arXiv.2308.09918> and\n<doi:10.48550/arXiv.2308.09919>.",
  "License": "GPL-2",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-28 09:48:55 UTC",
    "User": "root"
  },
  "Repository": "https://mmiranda-ugr.r-universe.dev",
  "Date/Publication": "2024-09-05 02:53:51 UTC",
  "RemoteUrl": "https://github.com/cran/pandemics",
  "RemoteRef": "HEAD",
  "RemoteSha": "b5f808cd99aa8bb3f33e801f73fe927bcbd770cb",
  "MD5sum": "e609f53c4d4d5c3fd0d7eed2a796412b",
  "_user": "mmiranda-ugr",
  "_type": "src",
  "_file": "pandemics_0.1.0.tar.gz",
  "_fileid": "0a01f1dacb8ab053cc05b79ce8f54790e0cfe3b3b2a7cbe1af8ef0fedcff243d",
  "_filesize": 166010,
  "_sha256": "0a01f1dacb8ab053cc05b79ce8f54790e0cfe3b3b2a7cbe1af8ef0fedcff243d",
  "_created": "2026-05-28T09:48:55.000Z",
  "_published": "2026-05-28T09:51:55.795Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 78265738031,
      "time": 105,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7262832392"
    },
    {
      "job": 78265738021,
      "time": 102,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7262831333"
    },
    {
      "job": 78265738008,
      "time": 143,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7262834732"
    },
    {
      "job": 78265738018,
      "time": 126,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7262830817"
    },
    {
      "job": 78265362734,
      "time": 138,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7262796019"
    },
    {
      "job": 78265738149,
      "time": 94,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7262828907"
    },
    {
      "job": 78265738095,
      "time": 74,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7262821750"
    },
    {
      "job": 78265738067,
      "time": 74,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7262821823"
    },
    {
      "job": 78265738030,
      "time": 61,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7262817724"
    }
  ],
  "_buildurl": "https://github.com/r-universe/mmiranda-ugr/actions/runs/26567345204",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cran/pandemics",
  "_commit": {
    "id": "b5f808cd99aa8bb3f33e801f73fe927bcbd770cb",
    "author": "María Dolores Martínez-Miranda <mmiranda@ugr.es>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 0.1.0\n",
    "time": 1725504831
  },
  "_maintainer": {
    "name": "María Dolores Martínez-Miranda",
    "email": "mmiranda@ugr.es",
    "login": "mmiranda-ugr",
    "description": "Full Professor of Statistics at the University of Granada",
    "uuid": 235139715
  },
  "_registered": true,
  "_dependencies": [],
  "_owner": "cran",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "mmiranda-ugr",
      "count": 1,
      "uuid": 235139715
    }
  ],
  "_userbio": {
    "uuid": 235139715,
    "type": "user",
    "name": "Lola Martinez-Miranda",
    "description": "Full Professor of Statistics at the University of Granada"
  },
  "_downloads": {
    "count": 151,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/pandemics"
  },
  "_searchresults": 0,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/pandemics.html",
    "manual.pdf"
  ],
  "_realowner": "mmiranda-ugr",
  "_cranurl": false,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2024-09-04"
    }
  ],
  "_exports": [
    "forecasting",
    "hazard2D",
    "hazard2Dmiss",
    "medtime",
    "poutcome",
    "rate2Dmiss"
  ],
  "_datasets": [
    {
      "name": "covid",
      "title": "COVID-19 Outbreak Data in France",
      "object": "covid",
      "class": [
        "data.frame"
      ],
      "fields": [
        "Date",
        "Hospi",
        "Death",
        "Recov",
        "Posit"
      ],
      "rows": 229,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "pandemics-package",
      "title": "Monitoring a Developing Pandemic with Available Data.",
      "topics": [
        "pandemics-package",
        "pandemics"
      ]
    },
    {
      "page": "covid",
      "title": "COVID-19 Outbreak Data in France",
      "topics": [
        "covid"
      ]
    },
    {
      "page": "forecasting",
      "title": "Forecasting infections, hospitalizations and deaths in hospital.",
      "topics": [
        "forecasting"
      ]
    },
    {
      "page": "hazard2D",
      "title": "Local Linear Estimator of the Two-Dimensional Marker-Dependent Hazard.",
      "topics": [
        "hazard2D"
      ]
    },
    {
      "page": "hazard2Dmiss",
      "title": "Local Linear Estimator of the Two-Dimensional Marker-Dependent Hazard from Missing-Survival-Link Data.",
      "topics": [
        "hazard2Dmiss"
      ]
    },
    {
      "page": "medtime",
      "title": "Median of the Time Spent in Hospital by Date of Admission.",
      "topics": [
        "medtime"
      ]
    },
    {
      "page": "poutcome",
      "title": "Probability of Outcome by Cause Specific.",
      "topics": [
        "poutcome"
      ]
    },
    {
      "page": "rate2Dmiss",
      "title": "Local Linear Estimator of the Two-Dimensional Infection (or Hospitalization) Rate from Missing-Survival-Link Data.",
      "topics": [
        "rate2Dmiss"
      ]
    }
  ],
  "_rundeps": [],
  "_score": 1,
  "_indexed": true,
  "_nocasepkg": "pandemics",
  "_universes": [
    "mmiranda-ugr"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-05-28T09:50:39.000Z",
      "distro": "noble",
      "commit": "b5f808cd99aa8bb3f33e801f73fe927bcbd770cb",
      "fileid": "c2fbbe95f8a6695e07b7679b3705c62140fb99ea6e92703f3d986e3c47a845c1",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/mmiranda-ugr/actions/runs/26567345204"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-05-28T09:50:36.000Z",
      "distro": "noble",
      "commit": "b5f808cd99aa8bb3f33e801f73fe927bcbd770cb",
      "fileid": "15e2f44a64f2cb826af15922d813397b835357ae94a902d8c7317436db249205",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/mmiranda-ugr/actions/runs/26567345204"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-05-28T09:50:51.000Z",
      "commit": "b5f808cd99aa8bb3f33e801f73fe927bcbd770cb",
      "fileid": "362e61d1985fdbc2c4fe9e120c76109021d5b4a08909ea4f16c373f0160c6fd2",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/mmiranda-ugr/actions/runs/26567345204"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-05-28T09:50:37.000Z",
      "commit": "b5f808cd99aa8bb3f33e801f73fe927bcbd770cb",
      "fileid": "52c968bb9c611cf1955297975a3c26617f23c38b025400611c038eb204697d43",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/mmiranda-ugr/actions/runs/26567345204"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.0",
      "date": "2026-05-28T09:50:44.000Z",
      "commit": "b5f808cd99aa8bb3f33e801f73fe927bcbd770cb",
      "fileid": "1c9f11c3cfc5762e3a06023f313051a94ef71cf9682b7eeb051ec8bdad333926",
      "status": "success",
      "buildurl": "https://github.com/r-universe/mmiranda-ugr/actions/runs/26567345204"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-05-28T09:50:03.000Z",
      "commit": "b5f808cd99aa8bb3f33e801f73fe927bcbd770cb",
      "fileid": "03a4284613bcadf088d6adb2a1320bf630202c1bedbc7fc08236ccbfaa98ff42",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/mmiranda-ugr/actions/runs/26567345204"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-05-28T09:50:04.000Z",
      "commit": "b5f808cd99aa8bb3f33e801f73fe927bcbd770cb",
      "fileid": "bde3cdeb37472d15b02a950be54836da442665a022fbee3afa0f3d436f6d5d61",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/mmiranda-ugr/actions/runs/26567345204"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-05-28T09:49:51.000Z",
      "commit": "b5f808cd99aa8bb3f33e801f73fe927bcbd770cb",
      "fileid": "cc8dd1bb9a480cd39a0aecc4be10ae8fd375cd2bcd5de4c39903394c743902f8",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/mmiranda-ugr/actions/runs/26567345204"
    }
  ]
}